2024

• Padraig Gleeson, Sharon Crook, Ankur Sinha, and Jonathan Cohen. Integrating model development across computational neuroscience, cognitive science and machine learning using the model description format—mdf. In 32nd Annual Computational Neuroscience Meeting: CNS*2023. 2024. URL: https://doi.org/10.1007/s10827-024-00871-5, doi:10.1007/s10827-024-00871-5. [ Bibtex ]
• Ankur Sinha, Filippo Ledda, Matteo Cantarelli, Salvador Dura-Burnal, Angus Silver, and Padraig Gleeson. Facilitating the development of data-driven, standardised cortical models in the cloud using neuroml and open source brain v2. In 32nd Annual Computational Neuroscience Meeting: CNS*2023. 2024. URL: https://doi.org/10.1007/s10827-024-00871-5, doi:10.1007/s10827-024-00871-5. [ Bibtex ]
• Ankur Sinha, Tuomo Mäki-Marttunen, Klaus Obermayer, Volker Steuber, and Christoph Metzner. Effects of ih channel modulation on excitability and dendritic integration in layer v pyramidal cells in health and in schizophrenia. In 32nd Annual Computational Neuroscience Meeting: CNS*2023. 2024. URL: https://doi.org/10.1007/s10827-024-00871-5, doi:10.1007/s10827-024-00871-5. [ Bibtex ]

2023

• Ankur Sinha, Christoph Metzner, Neil Davey, Rod Adams, Michael Schmuker, and Volker Steuber. Homeostatic structural and synaptic plasticity both contribute to the repair of peripherally-lesioned balanced networks. Journal of Computational Neuroscience, 51(1):3–101, 2023. URL: https://doi.org/10.1007/s10827-022-00841-9, doi:10.1007/s10827-022-00841-9. [ Bibtex ]

2022

• Bilal Shaikh, Lucian P Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S Andrews, Azraf Anwar, Moritz E Beber, Frank T Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G Bard Ermentrout, James R Faeder, Andrew P Freiburger, Fabian Fröhlich, Akira Funahashi, Alan Garny, John H Gennari, Padraig Gleeson, Anne Goelzer, Zachary Haiman, Jan Hasenauer, Joseph L Hellerstein, Henning Hermjakob, Stefan Hoops, Jon C Ison, Diego Jahn, Henry V Jakubowski, Ryann Jordan, Matúš Kalaš, Matthias König, Wolfram Liebermeister, Rahuman S Malik Sheriff, Synchon Mandal, Robert McDougal, J Kyle Medley, Pedro Mendes, Robert Müller, Chris J Myers, Aurelien Naldi, Tung V N Nguyen, David P Nickerson, Brett G Olivier, Drashti Patoliya, Loïc Paulevé, Linda R Petzold, Ankita Priya, Anand K Rampadarath, Johann M Rohwer, Ali S Saglam, Dilawar Singh, Ankur Sinha, Jacky Snoep, Hugh Sorby, Ryan Spangler, Jörn Starruß, Payton J Thomas, David van Niekerk, Daniel Weindl, Fengkai Zhang, Anna Zhukova, Arthur P Goldberg, James C Schaff, Michael L Blinov, Herbert M Sauro, Ion I Moraru, and Jonathan R Karr. BioSimulators: a central registry of simulation engines and services for recommending specific tools. Nucleic Acids Research, 2022. doi:10.1093/nar/gkac331. [ Bibtex ]

2021

• Ankur Sinha, Matteo Cantarelli, Salvador Dura-Burnal, Filippo Ledda, Zoran Sinnema, Angus Silver, and Padraig Gleeson. Open source brain v2.0: closing the loop between experimental neuroscience data and computational models. Journal Of Computational Neuroscience, 49(SUPPL 1, 1, SI):S75–S76, 2021. [ Bibtex ]
• Ankur Sinha, Christoph Metzner, Neil Davey, Roderick Adams, Michael Schmuker, and Volker Steuber. Growth rules for the repair of asynchronous irregular neuronal networks after peripheral lesions. PLOS Computational Biology, 17(6):1–35, 2021. URL: https://doi.org/10.1371/journal.pcbi.1008996, doi:10.1371/journal.pcbi.1008996. [ Bibtex ]
• Ankur Sinha, Christoph Metzner, Neil Davey, Roderick Adams, Micheal Schmuker, and Volker Steuber. Simulation generated data for: Growth Rules for the Repair of Asynchronous Irregular Neuronal Networks after Peripheral Lesions. 2021. URL: https://doi.org/10.5281/zenodo.4727700, doi:10.5281/zenodo.4727700. [ Bibtex ]

2020

• Ankur Sinha. Structural plasticity and associative memory in balanced neural networks with spike-time dependent inhibitory plasticity. PhD thesis, University of Hertfordshire, 2020. doi:10.18745/TH.23384. [ Bibtex ] [ PDF ]
• Ankur Sinha, Christoph Metzner, Roderick Adams, Neil Davey, Michael Schmuker, and Volker Steuber. Associative memory performance in peripherally-lesioned networks repaired by homeostatic structural plasticity. BMC Neuroscience, December 2020. 29th Annual Computational Neuroscience Meeting: CNS*2020 ; Conference date: 18-07-2020 Through 22-07-2020. doi:10.1186/s12868-020-00593-1. [ Bibtex ]
• Ankur Sinha, Aniket Pradhan, Qianqian Fang, Danny Lee, Danishka Navin, Alberto Rodriguez Sanchez, Luis Bazan, Luis M. Segundo, Alessio Ciregia, Zbigniew Jędrzejewski-Szmek, Sergio Pascual, Antonio Trande, Victor Manuel Tejada Yau, and Morgan Hough. Comp-neurofedora, a free/open source operating system for computational neuroscience: download, install, research. BMC Neuroscience, 2020. URL: https://labs.fedoraproject.org/comp-neuro. [ Bibtex ]

2019

• Jakob Jordan, Håkon Mørk, Stine Brekke Vennemo, Dennis Terhorst, Alexander Peyser, Tammo Ippen, Rajalekshmi Deepu, Jochen Martin Eppler, Alexander van Meegen, Susanne Kunkel, Ankur Sinha, Tanguy Fardet, Sandra Diaz, Abigail Morrison, Wolfram Schenck, David Dahmen, Jari Pronold, Jonas Stapmanns, Guido Trensch, Sebastian Spreizer, Jessica Mitchell, Steffen Graber, Johanna Senk, Charl Linssen, Jan Hahne, Alexey Serenko, Daniel Naoumenko, Eric Thomson, Itaru Kitayama, Sebastian Berns, and Hans Ekkehard Plesser. Nest 2.18.0. June 2019. URL: https://doi.org/10.5281/zenodo.2605422, doi:10.5281/zenodo.2605422. [ Bibtex ]
• Ankur Sinha, Luis Bazan, Luis M. Segundo, Zbigniew Jędrzejewski-Szmek, Christian J. Kellner, Sergio Pascual, Antonio Trande, Manas Mangaonkar, Tereza Hlaváčková, Morgan Hough, Ilya Gradina, and Igor Gnatenko. Neurofedora: a ready to use free/open source platform for neuroscientists. BMC Neuroscience, 20:58, 2019. URL: https://bmcneurosci.biomedcentral.com/articles/supplements/volume-20-supplement-1, doi:10.1186/s12868-019-0538-0. [ Bibtex ]
• Ankur Sinha, Christoph Metzner, Neil Davey, Roderick Adams, Michael Schmuker, and Volker Steuber. Growth rules for the repair of asynchronous irregular neuronal networks after peripheral lesions. bioRxiv, 2019. URL: https://www.biorxiv.org/content/early/2019/10/21/810846, arXiv:https://www.biorxiv.org/content/early/2019/10/21/810846.full.pdf, doi:10.1101/810846. [ Bibtex ]
• Ankur Sinha, Christoph Metzner, Neil Davey, Roderick Adams, Michael Schmuker, and Volker Steuber. Growth rules for repair of asynchronous irregular network models following peripheral lesions. BMC Neuroscience, 20:157, 2019. URL: https://bmcneurosci.biomedcentral.com/articles/supplements/volume-20-supplement-1, doi:10.1186/s12868-019-0538-0. [ Bibtex ]

2018

• Charl Linssen, Mikkel Elle Lepperød, Jessica Mitchell, Jari Pronold, Jochen Martin Eppler, Chrisitan Keup, Alexander Peyser, Susanne Kunkel, Philipp Weidel, Yannick Nodem, Dennis Terhorst, Rajalekshmi Deepu, Moritz Deger, Jan Hahne, Ankur Sinha, Alberto Antonietti, Maximilian Schmidt, Luciano Paz, Jesús Garrido, Tammo Ippen, Luis Riquelme, Alex Serenko, Tobias Kühn, Itaru Kitayama, Håkon Mørk, Sebastian Spreizer, Jakob Jordan, Jeyashree Krishnan, Mario Senden, Espen Hagen, Alexey Shusharin, Stine Brekke Vennemo, Dimitri Rodarie, Abigail Morrison, Steffen Graber, Jannis Schuecker, Sandra Diaz, Barna Zajzon, and Hans Ekkehard Plesser. Nest 2.16.0. 2018. doi:10.5281/zenodo.1400175. [ Bibtex ]
• Ankur Sinha, Christoph Metzner, Roderick Adams, Neil Davey, Michael Schmuker, and Volker Steuber. The combined effect of homeostatic structural and inhibitory synaptic plasticity during the repair of balanced networks following deafferentation. BMC Neuroscience, 19(2):129–130, 2018. URL: https://doi.org/10.1186/s12868-018-0451-y, doi:10.1186/s12868-018-0451-y. [ Bibtex ]

2017

• Susanne Kunkel, Abigail Morrison, Philipp Weidel, Jochen Martin Eppler, Ankur Sinha, Wolfram Schenck, Maximilian Schmidt, Stine Brekke Vennemo, Jakob Jordan, Alexander Peyser, Dimitri Plotnikov, Steffen Graber, Tanguy Fardet, Dennis Terhorst, Håkon Mørk, Guido Trensch, Alex Seeholzer, Rajalekshmi Deepu, Jan Hahne, Inga Blundell, Tammo Ippen, Jannis Schuecker, Hannah Bos, Sandra Diaz, Espen Hagen, Sepehr Mahmoudian, Claudia Bachmann, Mikkel Elle Lepperød, Oliver Breitwieser, Bruno Golosio, Hendrik Rothe, Hesam Setareh, Mikael Djurfeldt, Till Schumann, Alexey Shusharin, Jesús Garrido, Eilif Benjamin Muller, Arjun Rao, Juan Hernando Vieites, and Hans Ekkehard Plesser. Nest 2.12.0. 2017. doi:10.5281/zenodo.259534. [ Bibtex ]
• Alexander Peyser, Ankur Sinha, Stine Brekke Vennemo, Tammo Ippen, Jakob Jordan, Steffen Graber, Abigail Morrison, Guido Trensch, Tanguy Fardet, Håkon Mørk, Jan Hahne, Jannis Schuecker, Maximilian Schmidt, Susanne Kunkel, David Dahmen, Jochen Martin Eppler, Sandra Diaz, Dennis Terhorst, Rajalekshmi Deepu, Philipp Weidel, Itaru Kitayama, Sepehr Mahmoudian, David Kappel, Martin Schulze, Shailesh Appukuttan, Till Schumann, Hünkar Can Tunç, Jessica Mitchell, Michael Hoff, Eric Müller, Milena Menezes Carvalho, Barna Zajzon, and Hans Ekkehard Plesser. Nest 2.14.0. 2017. doi:10.5281/zenodo.882971. [ Bibtex ]
• A Sinha, C Metzner, R Adams, M Schmuker, N Davey, and V Steuber. The effect of homeostatic structural plasticity on associative memory in a network with spike-time dependent inhibitory synaptic plasticity. In BMC Neuroscience, 18(Suppl.1). 2017. URL: https://bmcneurosci.biomedcentral.com/articles/10.1186/s12868-017-0370-3. [ Bibtex ]

2015

• Ankur Sinha. Bio-mimetic navigation in a dynamic environment. Master's thesis, University of Techology, Sydney, 2015. URL: http://hdl.handle.net/10453/36990. [ Bibtex ] [ PDF ]
• Ankur Sinha, Neil Davey, Roderick Adams, and Volker Steuber. Structural plasticity and associative memory in balanced neural networks with spike-time dependent inhibitory plasticity. BMC Neuroscience, 16(1):1, 2015. URL: http://www.biomedcentral.com/1471-2202/16/S1/P235. [ Bibtex ]

2014

• Ankur Sinha and Jack Wang. An implementation of the path integrator mechanism of head direction cells for bio-mimetic navigation. In 2014 International Joint Conference on Neural Networks (IJCNN),, 1984–1991. Ieee, 2014. [ Bibtex ]
• Ankur Sinha and Jack Jianguo Wang. Bio-mimetic path integration using a self organizing population of grid cells. In Artificial Neural Networks and Machine Learning–ICANN 2014, pages 675. Springer, 2014. [ Bibtex ]